[Herpetology • 2017] Evolutionarily Significant Units of the Critically Endangered Leaf Frog Pithecopus ayeaye (Anura, Phyllomedusidae) are Not Effectively Preserved by the Brazilian Protected Areas Network ---ScRaBBlE

Pithecopus ayeaye B. Lutz, 1966

de Magalhães, Lemes, Camargo, et al. 2017. 

Photograph by R. A. Brandão. || DOI: 10.1002/ece3.3261   

Abstract

Protected areas (PAs) are essential for biodiversity conservation, but their coverage is considered inefficient for the preservation of all species. Many species are subdivided into evolutionarily significant units (ESUs) and the effectiveness of PAs in protecting them needs to be investigated. We evaluated the usefulness of the Brazilian PAs network in protecting ESUs of the critically endangered Pithecopus ayeaye through ongoing climate change. This species occurs in a threatened mountaintop ecosystem known as campos rupestres. We used multilocus DNA sequences to delimit geographic clusters, which were further validated as ESUs with a coalescent approach. Ecological niche modeling was used to estimate spatial changes in ESUs’ potential distributions, and a gap analysis was carried out to evaluate the effectiveness of the Brazilian PAs network to protect P. ayeaye in the face of climate changes. We tested the niche overlap between ESUs to gain insights for potential management alternatives for the species. Pithecopus ayeaye contains at least three ESUs isolated in distinct mountain regions, and one of them is not protected by any PA. There are no climatic niche differences between the units, and only 4% of the suitable potential area of the species is protected in present and future projections. The current PAs are not effective in preserving the intraspecific diversity of P. ayeaye in its present and future range distributions. The genetic structure of P. ayeaye could represent a typical pattern in campos rupestres endemics, which should be considered for evaluating its conservation status.

KEYWORD: Sapproximate Bayesian computation, campos rupestres, conservation genetics, ecological niche modeling, niche overlap, statistical phylogeography 

FIGURE 1: An individual of Pithecopus ayeaye B. Lutz, 1966 from type locality, Morro do Ferro, Poços de Caldas—MG.

Photograph by Reuber Albuquerque Brandão. 

Rafael Félix de Magalhães, Priscila Lemes, Arley Camargo, Ubirajara Oliveira, Reuber Albuquerque Brandão, Hans Thomassen, Paulo Christiano de Anchietta Garcia, Felipe Sá Fortes Leite and Fabrício Rodrigues Santos. 2017. Evolutionarily Significant Units of the Critically Endangered Leaf Frog Pithecopus ayeaye (Anura, Phyllomedusidae) are Not Effectively Preserved by the Brazilian Protected Areas Network.  Ecology and Evolution. 7(21); 8812–8828.  DOI: 10.1002/ece3.3261  

ResearchGate.net/publication/319957237_Evolutionarily_significant_units_of_the_critically_endangered_leaf_frog_Pithecopus_ayeaye_Anura_Phyllomedusidae_are_not_effectively_preserved_by_the_Brazilian_protected_areas_network

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روابط التحميل والمشاهدة، الروابط المباشرة للتحميل

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شاهد هذا الفيديو القصير لطريقة التحميل البسيطة

منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات

كيف تحصل على مدونة جاهزة بآلاف المواضيع والمشاركات من هنا

شاهد قناة منتدى مدونات بلوجر جاهزة بألاف المواضيع والمشاركات على اليوتيوب لمزيد من الشرح من هنا

رابط مدونة منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات في أي وقت حــــتى لو تم حذفها من هنا
شاهد صفحة منتدى مدونات بلوجر جاهزة بألاف المواضيع والمشاركات على الفيس بوك لمزيد من الشرح من هنا

تعرف على ترتيب مواضيع منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات (حتى لا تختلط عليك الامور) من هنا

ملاحظة هامة: كل عمليات تنزيل، رفع، وتعديل المواضيع الجاهزة تتم بطريقة آلية، ونعتذر عن اي موضوع مخالف او مخل بالحياء مرفوع بالمدونات الجاهزة بآلاف المواضيع والمشاركات، ولكم ان تقوموا بحذف هذه المواضيع والمشاركات والطريقة بسيطة وسهلة. ــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــسلامـ.

[Herpetology • 2017] Identification of Genetically Important Individuals of the Rediscovered Floreana Galápagos Giant Tortoise (Chelonoidis elephantopus) Provide Founders for Species Restoration Program ---ScRaBBlE

Abstract

Species are being lost at an unprecedented rate due to human-driven environmental changes. The cases in which species declared extinct can be revived are rare. However, here we report that a remote volcano in the Galápagos Islands hosts many giant tortoises with high ancestry from a species previously declared as extinct: Chelonoidis elephantopus or the Floreana tortoise. Of 150 individuals with distinctive morphology sampled from the volcano, genetic analyses revealed that 65 had C. elephantopus ancestry and thirty-two were translocated from the volcano’s slopes to a captive breeding center. A genetically informed captive breeding program now being initiated will, over the next decades, return C. elephantopus tortoises to Floreana Island to serve as engineers of the island’s ecosystems. Ironically, it was the haphazard translocations by mariners killing tortoises for food centuries ago that created the unique opportunity to revive this “lost” species today.

Figure 1: Distribution of tortoises among Galápagos Islands and representative photos of tortoise carapace morphology.
(a) Map of the distribution of tortoises among Galápagos Islands along with cartoons indicating carapace morphology for each. Light grey shading indicates domed morphology, unshaded indicates saddle-backed. Extinct species are noted with †. (b) Larger view of Volcano Wolf on northern Isabela Island. The circle indicates the approximate field location of the current study. Examples of Galápagos giant tortoises with domed (c) saddle-backed (d) morphology.  

Joshua M. Miller, Maud C. Quinzin, Nikos Poulakakis, James P. Gibbs, Luciano B. Beheregaray, Ryan C. Garrick, Michael A. Russello, Claudio Ciofi, Danielle L. Edwards, Elizabeth A. Hunter, Washington Tapia, Danny Rueda, Jorge Carrión, Andrés A. Valdivieso and Adalgisa Caccone. 2017. Identification of Genetically Important Individuals of the Rediscovered Floreana Galápagos Giant Tortoise (Chelonoidis elephantopus) Provide Founders for Species Restoration Program. Scientific Reports. 7, Article number: 11471. DOI: 10.1038/s41598-017-11516-2

Back from the dead—how to revive a lost species
 phy.so/424511176 via @physorg_com

  

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روابط التحميل والمشاهدة، الروابط المباشرة للتحميل

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شاهد هذا الفيديو القصير لطريقة التحميل البسيطة

منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات

كيف تحصل على مدونة جاهزة بآلاف المواضيع والمشاركات من هنا

شاهد قناة منتدى مدونات بلوجر جاهزة بألاف المواضيع والمشاركات على اليوتيوب لمزيد من الشرح من هنا

رابط مدونة منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات في أي وقت حــــتى لو تم حذفها من هنا
شاهد صفحة منتدى مدونات بلوجر جاهزة بألاف المواضيع والمشاركات على الفيس بوك لمزيد من الشرح من هنا

تعرف على ترتيب مواضيع منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات (حتى لا تختلط عليك الامور) من هنا

ملاحظة هامة: كل عمليات تنزيل، رفع، وتعديل المواضيع الجاهزة تتم بطريقة آلية، ونعتذر عن اي موضوع مخالف او مخل بالحياء مرفوع بالمدونات الجاهزة بآلاف المواضيع والمشاركات، ولكم ان تقوموا بحذف هذه المواضيع والمشاركات والطريقة بسيطة وسهلة. ــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــسلامـ.

[Herpetology • 2017] Living Quarters of A Living Fossil - Uncovering the Current Distribution Pattern of the Rediscovered Hula Painted Frog (Latonia nigriventer) using Environmental DNA ---ScRaBBlE

Latonia nigriventer (Mendelssohn & Steinitz, 1943)

photo: @Roll_Ur   || DOI:  10.1111/mec.14420 

Abstract   

One of the greatest challenges of effective conservation measures is the correct identification of sites where rare and elusive organisms reside. The recently rediscovered Hula painted frog (Latonia nigriventer) has not been seen for many decades, and was therefore categorized extinct. Since its rediscovery in 2011, individuals from the critically endangered species have been found, with great effort, only in four restricted sites. We applied the environmental DNA (eDNA) approach to search for new populations of the Hula painted frog in suitable aquatic habitats. We further used the eDNA data to classify the landscape factors associated with the species distribution and to predict its suitable habitats. We sampled 52 aquatic sites in the Hula valley during the spring of 2015 and 2016, and amplified the samples with a species-specific qPCR assay. DNA of the Hula painted frog was detected in 22 of the sites, all of which clustered within three main areas. A boosting classification model showed that soil type, vegetation cover, and the current and former habitats are all key predictors of the frog's current distribution. Intriguingly, the habitat suitability models reveal a high affinity of the species to its long-lost habitat of the historical wetlands. Our findings encourage a series of informed searches for new populations of this threatened frog, and provide guidance for future conservation management programs. In the era of global conservation crisis of amphibians, developing the eDNA approach, a reliable detection method for many critically endangered and elusive amphibians, is of particularly importance.

Keywords: Conservation genetics; Genetic monitoring; Amphibians; Species distribution modelling (SDM)

Sharon Renan, Sarig Gafny, R. G. Bina Perl, Uri Roll, Yoram Malka, Miguel Vences and Eli Geffen. 2017. Living Quarters of A Living Fossil - Uncovering the Current Distribution Pattern of the Rediscovered Hula Painted Frog (Latonia nigriventer) using Environmental DNA. Molecular Ecology. DOI:  10.1111/mec.14420 

 Using #eDNA analysis we were able to map suitable habitats for the newly re-discovered #Living_fossil -the Hula_painted_frog, and see that it retains its affinity to the now drained Hula lake and swamp. #Molecular_Ecology  || Detection of Hula painted frogs using eDNA

 twitter.com/Roll_Uri/status/929652326943592448

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روابط التحميل والمشاهدة، الروابط المباشرة للتحميل

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شاهد هذا الفيديو القصير لطريقة التحميل البسيطة

منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات

كيف تحصل على مدونة جاهزة بآلاف المواضيع والمشاركات من هنا

شاهد قناة منتدى مدونات بلوجر جاهزة بألاف المواضيع والمشاركات على اليوتيوب لمزيد من الشرح من هنا

رابط مدونة منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات في أي وقت حــــتى لو تم حذفها من هنا
شاهد صفحة منتدى مدونات بلوجر جاهزة بألاف المواضيع والمشاركات على الفيس بوك لمزيد من الشرح من هنا

تعرف على ترتيب مواضيع منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات (حتى لا تختلط عليك الامور) من هنا

ملاحظة هامة: كل عمليات تنزيل، رفع، وتعديل المواضيع الجاهزة تتم بطريقة آلية، ونعتذر عن اي موضوع مخالف او مخل بالحياء مرفوع بالمدونات الجاهزة بآلاف المواضيع والمشاركات، ولكم ان تقوموا بحذف هذه المواضيع والمشاركات والطريقة بسيطة وسهلة. ــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــسلامـ.

[Entomology • 2017] Ectinogonia cryptica • Genetic and Morphological Evidence for A New Cryptic Species of Ectinogonia (Coleoptera: Buprestidae) from central Chile ---ScRaBBlE

Ectinogonia cryptica

Anguita-Salinas, Barahona-Rodrigo, Poulin & Zúñiga-Reinoso, 2017

 DOI: 10.11646/zootaxa.4303.2.8 

Abstract

The genus Ectinogonia Spinola, 1837 is a genus mainly found in Chile; it currently contains 17 species. Recent exploration in the Andes Mountain Range of the Bio Bio Region in Chile have resulted in the collection of specimens slightly different morphologically from all previously described species. The aim of this paper is to describe this new species of Ectinogonia using morphological and genetic evidence. To establish differences between species we described the external morphology and compared it to species that are morphologically similar (i.e. E. buqueti Spinola 1837 and E. intermedia Kerremans 1903). We also measured the genetic differences in COI sequences, constructing a distance matrix in which we compared it to species that are morphologically similar (E. buqueti and E. intermedia) and other species found in the same region (E. speciosa oscuripennis Moore 1994). We found that Ectinogonia cryptica sp. n. differs from E. buqueti (which previously contained E. cryptica sp. n.) in pronotum and elytral patterns. The genetic distance matrix shows that E. cryptica sp. n. differs by 4.6% from all other Ectinogonia species compared, supporting the morphological evidence.

Keywords: Coleoptera, Chrysochroinae, Dicercini, Ectinogonia cryptica sp. n., genetic distance, taxonomy

Simón Anguita-Salinas, Rodrigo M. Barahona-Rodrigo, Elie Poulin and Alvaro Zúñiga-Reinoso. 2017. Genetic and Morphological Evidence for A New Cryptic Species of Ectinogonia (Coleoptera: Buprestidae) from central Chile. Zootaxa. 4303(2); 284–292. DOI: 10.11646/zootaxa.4303.2.8

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روابط التحميل والمشاهدة، الروابط المباشرة للتحميل

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شاهد هذا الفيديو القصير لطريقة التحميل البسيطة

منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات

كيف تحصل على مدونة جاهزة بآلاف المواضيع والمشاركات من هنا

شاهد قناة منتدى مدونات بلوجر جاهزة بألاف المواضيع والمشاركات على اليوتيوب لمزيد من الشرح من هنا

رابط مدونة منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات في أي وقت حــــتى لو تم حذفها من هنا
شاهد صفحة منتدى مدونات بلوجر جاهزة بألاف المواضيع والمشاركات على الفيس بوك لمزيد من الشرح من هنا

تعرف على ترتيب مواضيع منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات (حتى لا تختلط عليك الامور) من هنا

ملاحظة هامة: كل عمليات تنزيل، رفع، وتعديل المواضيع الجاهزة تتم بطريقة آلية، ونعتذر عن اي موضوع مخالف او مخل بالحياء مرفوع بالمدونات الجاهزة بآلاف المواضيع والمشاركات، ولكم ان تقوموا بحذف هذه المواضيع والمشاركات والطريقة بسيطة وسهلة. ــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــسلامـ.

[Mammalogy • 2018] Ethiopian Highlands as A Cradle of the African Fossorial Root-rats (Genus Tachyoryctes), the Genetic Evidence ---ScRaBBlE

Šumbera, Krásová, Lavrenchenko, et al., 2018.

  DOI: 10.1016/j.ympev.2018.04.003 

 Highlights

• Six major genetic clades do not correspond to the expected two or 13 root-rat species.

• Ethiopian, and not Kenyan, highlands are the cradle of the genus diversity.

• Root-rat history was shaped by climatic oscillations and complex geomorphology.

• The giant root-rat is an internal lineage of the genus modified for life in the Afroalpine.

• Root-rats and mole-rats represent different specialisations for the subterranean niche.

Abstract

Root-rats of the genus Tachyoryctes (Spalacidae) are subterranean herbivores occupying open humid habitats in the highlands of Eastern Africa. There is strong disagreement about species diversity of the genus, because some authors accept two species, while others more than ten. Species with relatively high surface activity, the giant root-rat Tachyoryctes macrocephalus, which is by far largest member of the genus, and the more fossorial African root-rat Tachyoryctes splendens, which eventually has been divided up to 12-13 species, represent two major morphological forms within the genus. In our study, we carried out a multilocus analysis of root-rats’ genetic diversity based on samples from 41 localities representing most of Tachyoryctes geographic distribution. Using two mitochondrial and three nuclear genes, we found six main genetic clades possibly representing separate species. These clades were organised into three basal groups whose branching is not well resolved, probably due to fast radiation in the late Pliocene and early Pleistocene. Climatic changes in that time, i.e. fast and repeated changes between extremely dry and humid conditions, which both limited root-rat dispersal, probably stimulated their initial genetic diversification. Contrary to expectation based on the largest root-rat diversity in Kenya (up to eight species by some authors), we found the highest diversity in the Ethiopian highlands, because all but one putative species occur there. All individuals outside of Ethiopia belong to a single recently diverged and expanded clade. This species should bear the name T. annectens (Thomas, 1891), and all other names of taxa described from outside of Ethiopia should be considered its junior synonyms. However, to solve taxonomic issues, future detailed morphological analyses should be conducted on all main clades together with genetic analysis of material from areas of their supposed contact. One of the most interesting findings of the study is the internal position of T. macrocephalus in T. splendens sensu lato. This demonstrates the intriguing phenomenon of accelerated morphological evolution of rodents occupying the Afroalpine zone in Ethiopia. Finally, we discuss how the distribution of Tachyoryctes is influenced by competition with another group of subterranean herbivores on the continent, the African mole-rats. We assume that both groups do not compete directly as previously expected, but specialisation to different subterranean niches is the main factor responsible for their spatial segregation.

Keywords: Tachyoryctes; fossorial rodent; Eastern Africa; Plio-Pleistocene climatic changes; Great Rift Valley; multi-species coalescent

 Conclusion: 

Contrary to the expectation that root-rats have their highest species diversity in the Kenyan highlands, our results convincingly demonstrated that the Ethiopian mountains are the centre of genus diversity and the cradle of the whole group. The evolution of extant root-rats took place in the Pleistocene and was affected mainly by the interplay between climate changes and the complex geomorphology, with the presence of high mountain massifs, in Ethiopia. Root-rat genetic structure in Ethiopia suggests several cryptic species that should be explored in future taxonomic work, because it is clear that current taxonomy does not reflect the evolutionary history of the genus at all. Probably all taxa described from outside Ethiopia are descendants of a single relatively recent “out-of-Ethiopia” dispersal event and should be considered as conspecific. The fact that the largest and morphologically most deviating species, T. macrocephalus, is not a sister but an internal lineage of “splendens” is further evidence of a fast morphological evolution in response to strong selection in the Afroalpine environment in Ethiopia. We may expect that more thorough genetic surveys of unique Afroalpine taxa will reveal more such findings not only in mammals, but also in other groups of vertebrates. Finally, ecological, behavioural and physiological studies could reveal how the distribution of root-rats is influenced by competition with the African mole-rats, another group of African rodents with subterranean habits.

Radim Šumbera, Jarmila Krásová, Leonid A. Lavrenchenko, Sewnet Mengistu, Afework Bekele, Ondřej Mikula and Josef Bryja. 2018. Ethiopian Highlands as A Cradle of the African Fossorial Root-rats (Genus Tachyoryctes), the Genetic Evidence. Molecular Phylogenetics and Evolution. In Press.   DOI: 10.1016/j.ympev.2018.04.003

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روابط التحميل والمشاهدة، الروابط المباشرة للتحميل

من هنا

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من هنا

شاهد هذا الفيديو القصير لطريقة التحميل البسيطة

منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات

كيف تحصل على مدونة جاهزة بآلاف المواضيع والمشاركات من هنا

شاهد قناة منتدى مدونات بلوجر جاهزة بألاف المواضيع والمشاركات على اليوتيوب لمزيد من الشرح من هنا

رابط مدونة منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات في أي وقت حــــتى لو تم حذفها من هنا
شاهد صفحة منتدى مدونات بلوجر جاهزة بألاف المواضيع والمشاركات على الفيس بوك لمزيد من الشرح من هنا

تعرف على ترتيب مواضيع منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات (حتى لا تختلط عليك الامور) من هنا

ملاحظة هامة: كل عمليات تنزيل، رفع، وتعديل المواضيع الجاهزة تتم بطريقة آلية، ونعتذر عن اي موضوع مخالف او مخل بالحياء مرفوع بالمدونات الجاهزة بآلاف المواضيع والمشاركات، ولكم ان تقوموا بحذف هذه المواضيع والمشاركات والطريقة بسيطة وسهلة. ــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــسلامـ.

[Botany • 2018] Genomics of the Origin and Evolution of Citrus ---ScRaBBlE

Proposed origin of Citrus and ancient dispersal routes. Arrows suggest plausible migration directions of the ancestral citrus species from the centre of origin—the triangle formed by northeastern India, northern Myanmar and northwestern Yunnan. The proposal is compatible with citrus biogeography, phylogenetic relationships, the inferred timing of diversification and the paleogeography of the region, especially the geological history of Wallacea and Japan. The red star marks the fossil location of C. linczangensis. Citrus fruit images in c and d are not drawn to scale.

Wu, Terol, Ibanez, et al., 2018. 

   DOI: 10.1038/nature25447

Abstract

The genus Citrus, comprising some of the most widely cultivated fruit crops worldwide, includes an uncertain number of species. Here we describe ten natural citrus species, using genomic, phylogenetic and biogeographic analyses of 60 accessions representing diverse citrus germ plasms, and propose that citrus diversified during the late Miocene epoch through a rapid southeast Asian radiation that correlates with a marked weakening of the monsoons. A second radiation enabled by migration across the Wallace line gave rise to the Australian limes in the early Pliocene epoch. Further identification and analyses of hybrids and admixed genomes provides insights into the genealogy of major commercial cultivars of citrus. Among mandarins and sweet orange, we find an extensive network of relatedness that illuminates the domestication of these groups. Widespread pummelo admixture among these mandarins and its correlation with fruit size and acidity suggests a plausible role of pummelo introgression in the selection of palatable mandarins. This work provides a new evolutionary framework for the genus Citrus.

Figure 1: Genetic structure, heterozygosity and phylogeny of Citrus species.  a, Principal coordinate analysis of 58 citrus accessions based on pairwise nuclear genome distances and metric multidimensional scaling. The first two axes separate the three main citrus groups (citrons, pummelos and mandarins) with interspecific hybrids (oranges, grapefruit, lemon and limes) situated at intermediate positions relative to their parental genotypes. b, Violin plots of the heterozygosity distribution in 58 citrus accessions, representing 10 taxonomic groups as well as 2 related genera, Poncirus (Poncirus trifoliata, also known as Citrus trifoliata) and Chinese box orange (Severinia). White dot, median; bar limits, upper and lower quartiles; whiskers, 1.5× interquartile range. The bimodal separation of intraspecies (light blue) and interspecies (light pink) genetic diversity is manifested among the admixed mandarins and across different genotypes including interspecific hybrids. Three-letter codes are listed in parenthesis with additional descriptions in Supplementary Table 2. c, Chronogram of citrus speciation. Two distinct and temporally well-separated phases of species radiation are apparent, with the southeast Asian citrus radiation followed by the Australian citrus diversification. Age calibration is based on the citrus fossil C. linczangensis16 from the Late Miocene (denoted by a filled red circle). The 95% confidence intervals are derived from 200 bootstraps. Bayesian posterior probability is 1.0 for all nodes. d, Proposed origin of citrus and ancient dispersal routes. Arrows suggest plausible migration directions of the ancestral citrus species from the centre of origin—the triangle formed by northeastern India, northern Myanmar and northwestern Yunnan. The proposal is compatible with citrus biogeography, phylogenetic relationships, the inferred timing of diversification and the paleogeography of the region, especially the geological history of Wallacea and Japan. The red star marks the fossil location of C. linczangensis. Citrus fruit images in c and d are not drawn to scale.

Guohong Albert Wu, Javier Terol, Victoria Ibanez, Antonio López-García, Estela Pérez-Román, Carles Borredá, Concha Domingo, Francisco R. Tadeo, Jose Carbonell-Caballero, Roberto Alonso, Franck Curk, Dongliang Du, Patrick Ollitrault, Mikeal L. Roose, Joaquin Dopazo, Frederick G. Gmitter, Daniel S. Rokhsar and Manuel Talon. 2018. Genomics of the Origin and Evolution of Citrus.  Nature.   DOI: 10.1038/nature25447

  

The Citrus Family Tree  on.natgeo.com/2AQGWMo   @NatGeoMag

  

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روابط التحميل والمشاهدة، الروابط المباشرة للتحميل

من هنا

او

من هنا

شاهد هذا الفيديو القصير لطريقة التحميل البسيطة

منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات

كيف تحصل على مدونة جاهزة بآلاف المواضيع والمشاركات من هنا

شاهد قناة منتدى مدونات بلوجر جاهزة بألاف المواضيع والمشاركات على اليوتيوب لمزيد من الشرح من هنا

رابط مدونة منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات في أي وقت حــــتى لو تم حذفها من هنا
شاهد صفحة منتدى مدونات بلوجر جاهزة بألاف المواضيع والمشاركات على الفيس بوك لمزيد من الشرح من هنا

تعرف على ترتيب مواضيع منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات (حتى لا تختلط عليك الامور) من هنا

ملاحظة هامة: كل عمليات تنزيل، رفع، وتعديل المواضيع الجاهزة تتم بطريقة آلية، ونعتذر عن اي موضوع مخالف او مخل بالحياء مرفوع بالمدونات الجاهزة بآلاف المواضيع والمشاركات، ولكم ان تقوموا بحذف هذه المواضيع والمشاركات والطريقة بسيطة وسهلة. ــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــسلامـ.

[Cnidaria • 2018] A Simple Molecular Technique for Distinguishing Species reveals Frequent Misidentification of Hawaiian Corals in the Genus Pocillopora ---ScRaBBlE

colonies of Pocillopora spp. from O‘ahu, Hawai‘i;
(B–D) Pocillopora ligulata, (F–I) P. meandrina and (K–M) P. eydouxi. 

Johnston​, Forsman & Toonen, 2018.

 DOI:  10.7717/peerj.4355 

Abstract

Species within the scleractinian genus Pocillopora Lamarck 1816 exhibit extreme phenotypic plasticity, making identification based on morphology difficult. However, the mitochondrial open reading frame (mtORF) marker provides a useful genetic tool for identification of most species in this genus, with a notable exception of P. eydouxi and P. meandrina. Based on recent genomic work, we present a quick and simple, gel-based restriction fragment length polymorphism (RFLP) method for the identification of all six Pocillopora species occurring in Hawai‘i by amplifying either the mtORF region, a newly discovered histone region, or both, and then using the restriction enzymes targeting diagnostic sequences we unambiguously identify each species. Using this approach, we documented frequent misidentification of Pocillopora species based on colony morphology. We found that P. acuta colonies are frequently mistakenly identified as P. damicornis in Kāne‘ohe Bay, O‘ahu. We also found that P. meandrina likely has a northern range limit in the Northwest Hawaiian Islands, above which P. ligulata was regularly mistaken for P. meandrina.

Figure 3: Images of Pocillopora ligulata colonies, (A)–(E); P. meandrina colonies, (F)–(J); and P. eydouxi colonies, (K)–(O) from O‘ahu, Hawai‘i. 

Figure 1: Pocillopora species composition across the Hawaiian Islands for samples collected from colonies demonstrating P. meandrina morphology. The size of the pie chart is proportional to the number of individuals sampled per island. Pocillopora species are represented by different colors, specifically: P. meandrina, light yellow; P. eydouxi, dark yellow; P. ligulata, light blue; and P. verrucosa, dark blue.

Conclusions: 

Here, we present an assay that allows rapid and unambiguous identification of all six species of Pocillopora present in Hawai‘i, which we hope will work anywhere these species are found. We present two cases where samples identified morphologically were misidentified to highlight the utility of this approach. Taxonomic confusion can impact a wide range of studies and the ability to rapidly and cost-effectively distinguish among species of Pocillopora will benefit future studies of population structure, ecology, biodiversity, evolution and conservation in this challenging genus.

Erika C. Johnston​, Zac H. Forsman and Robert J. Toonen. 2018. A Simple Molecular Technique for Distinguishing Species reveals Frequent Misidentification of Hawaiian Corals in the Genus Pocillopora.  PeerJ. 6:e4355.  DOI:  10.7717/peerj.4355

  

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روابط التحميل والمشاهدة، الروابط المباشرة للتحميل

من هنا

او

من هنا

شاهد هذا الفيديو القصير لطريقة التحميل البسيطة

منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات

كيف تحصل على مدونة جاهزة بآلاف المواضيع والمشاركات من هنا

شاهد قناة منتدى مدونات بلوجر جاهزة بألاف المواضيع والمشاركات على اليوتيوب لمزيد من الشرح من هنا

رابط مدونة منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات في أي وقت حــــتى لو تم حذفها من هنا
شاهد صفحة منتدى مدونات بلوجر جاهزة بألاف المواضيع والمشاركات على الفيس بوك لمزيد من الشرح من هنا

تعرف على ترتيب مواضيع منتدى مدونات بلوجر جاهزة بآلاف المواضيع والمشاركات (حتى لا تختلط عليك الامور) من هنا

ملاحظة هامة: كل عمليات تنزيل، رفع، وتعديل المواضيع الجاهزة تتم بطريقة آلية، ونعتذر عن اي موضوع مخالف او مخل بالحياء مرفوع بالمدونات الجاهزة بآلاف المواضيع والمشاركات، ولكم ان تقوموا بحذف هذه المواضيع والمشاركات والطريقة بسيطة وسهلة. ــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــــسلامـ.